Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gm11434-201ENSMUST00000122379 629 ntBASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf220Q6PDX6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf220Q6PDX6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf220Q6PDX6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms