Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ShbQ6PD21 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm24791-201ENSMUST00000104284 131 ntBASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm10169-201ENSMUST00000121822 348 ntBASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm25604-201ENSMUST00000158359 133 ntBASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm19587-201ENSMUST00000191395 545 ntBASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm44647-201ENSMUST00000207402 428 ntBASIC13.28□□□□□ -0.28
ShbQ6PD21 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.28□□□□□ -0.28
ShbQ6PD21 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.28□□□□□ -0.28
ShbQ6PD21 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
ShbQ6PD21 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShbQ6PD21 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShbQ6PD21 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm15003-201ENSMUST00000118884 446 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm13117-201ENSMUST00000120894 691 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm24248-201ENSMUST00000157321 322 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm8451-201ENSMUST00000170338 447 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm7536-201ENSMUST00000077389 444 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm5453-201ENSMUST00000080866 447 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.27□□□□□ -0.29
ShbQ6PD21 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ShbQ6PD21 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShbQ6PD21 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm14807-201ENSMUST00000116640 983 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm14892-201ENSMUST00000117636 267 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm7150-201ENSMUST00000122032 981 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm38117-201ENSMUST00000194653 939 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.26□□□□□ -0.29
ShbQ6PD21 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShbQ6PD21 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms