Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Gm13829-201ENSMUST00000119600 138 ntBASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Gm5904-201ENSMUST00000210286 865 ntBASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Gm13736-201ENSMUST00000119272 253 ntBASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Gm44405-201ENSMUST00000198952 126 ntBASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Gm24136-201ENSMUST00000083374 165 ntBASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sp140Q6NSQ5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms