Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Gm44065-201ENSMUST00000203184 3527 ntBASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Gm43275-201ENSMUST00000202053 1020 ntBASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Gm6855-201ENSMUST00000206307 790 ntBASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Gm14005-208ENSMUST00000223654 681 ntBASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarca2Q6DIC0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm11502-201ENSMUST00000120917 1211 ntBASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm10169-201ENSMUST00000121822 348 ntBASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm5340-201ENSMUST00000203733 880 ntBASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarca2Q6DIC0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Gm8574-201ENSMUST00000203207 924 ntBASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 Grk6-205ENSMUST00000224653 2976 ntBASIC21.22■□□□□ 0.99
Smarca2Q6DIC0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Gm4900-201ENSMUST00000222046 1628 ntBASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC21.21■□□□□ 0.99
Smarca2Q6DIC0 Gm14807-201ENSMUST00000116640 983 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms