Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scn9aQ62205 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Scn9aQ62205 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm12948-201ENSMUST00000119406 682 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Scn9aQ62205 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.36□□□□□ -0.11
Scn9aQ62205 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn9aQ62205 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm25063-201ENSMUST00000104666 94 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Mir6407-201ENSMUST00000184510 101 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm38151-201ENSMUST00000195085 289 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scn9aQ62205 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.35□□□□□ -0.11
Scn9aQ62205 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn9aQ62205 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm38117-201ENSMUST00000194653 939 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm42779-201ENSMUST00000198807 406 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm23680-201ENSMUST00000083162 164 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn9aQ62205 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm14274-201ENSMUST00000117182 615 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm24398-201ENSMUST00000157870 109 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Gm43778-201ENSMUST00000199438 199 ntBASIC14.34□□□□□ -0.11
Scn9aQ62205 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms