Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.36□□□□□ -0.59
VcanQ62059 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.36□□□□□ -0.59
VcanQ62059 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VcanQ62059 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm24934-201ENSMUST00000103764 111 ntBASIC11.36□□□□□ -0.59
VcanQ62059 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
VcanQ62059 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.36□□□□□ -0.59
VcanQ62059 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.36□□□□□ -0.59
VcanQ62059 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VcanQ62059 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.36□□□□□ -0.59
VcanQ62059 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VcanQ62059 Gm22379-201ENSMUST00000157480 131 ntBASIC11.36□□□□□ -0.59
VcanQ62059 Gm39288-201ENSMUST00000210554 446 ntBASIC11.36□□□□□ -0.59
VcanQ62059 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VcanQ62059 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
VcanQ62059 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Gm8815-201ENSMUST00000173809 620 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Gm7627-201ENSMUST00000183205 999 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Gm43852-201ENSMUST00000202098 917 ntBASIC11.35□□□□□ -0.59
VcanQ62059 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Gm8342-201ENSMUST00000209839 757 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
VcanQ62059 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.35□□□□□ -0.59
VcanQ62059 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
VcanQ62059 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VcanQ62059 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VcanQ62059 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VcanQ62059 Gm11957-201ENSMUST00000118304 779 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VcanQ62059 Gm22763-201ENSMUST00000158374 107 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.35□□□□□ -0.59
VcanQ62059 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.35□□□□□ -0.59
VcanQ62059 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.35□□□□□ -0.59
VcanQ62059 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VcanQ62059 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VcanQ62059 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.34□□□□□ -0.59
VcanQ62059 Gm26134-201ENSMUST00000178484 110 ntBASIC11.34□□□□□ -0.59
VcanQ62059 Gm8824-201ENSMUST00000182962 990 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms