Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Gm5070-201ENSMUST00000177599 862 ntBASIC12.95□□□□□ -0.34
Smarcd1Q61466 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Gm19187-201ENSMUST00000206781 892 ntBASIC12.95□□□□□ -0.34
Smarcd1Q61466 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm14644-201ENSMUST00000116671 647 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm14130-201ENSMUST00000118417 987 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm26361-201ENSMUST00000158868 186 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm25700-201ENSMUST00000177693 110 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm18056-201ENSMUST00000207670 568 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm18061-201ENSMUST00000208350 562 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm18063-201ENSMUST00000208529 568 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Gm18052-201ENSMUST00000208750 559 ntBASIC12.94□□□□□ -0.34
Smarcd1Q61466 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcd1Q61466 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm15236-201ENSMUST00000117309 379 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm9230-201ENSMUST00000188228 532 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm45598-202ENSMUST00000210719 986 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm19994-201ENSMUST00000217086 586 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms