Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfaip3Q60769 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm12314-201ENSMUST00000118104 538 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm11597-201ENSMUST00000121423 964 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm15547-201ENSMUST00000122152 333 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm27243-201ENSMUST00000183964 521 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm10076-201ENSMUST00000073238 384 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfaip3Q60769 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm23270-201ENSMUST00000104055 131 ntBASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfaip3Q60769 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms