Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm14999-201ENSMUST00000121039 624 ntBASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm14832-201ENSMUST00000121289 322 ntBASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Mir5120-201ENSMUST00000175020 78 ntBASIC13.25□□□□□ -0.29
Shroom1Q5SX79 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Gm44651-201ENSMUST00000207343 372 ntBASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shroom1Q5SX79 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm12015-201ENSMUST00000117065 843 ntBASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm24845-201ENSMUST00000158034 109 ntBASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm25700-201ENSMUST00000177693 110 ntBASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Rprl1-202ENSMUST00000198476 238 ntBASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shroom1Q5SX79 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.23□□□□□ -0.29
Shroom1Q5SX79 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms