Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm15276-201ENSMUST00000145953 498 ntBASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm25700-201ENSMUST00000177693 110 ntBASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.91□□□□□ -0.02
Vps54Q5SPW0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Gm18056-201ENSMUST00000207670 568 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Gm18061-201ENSMUST00000208350 562 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Gm18063-201ENSMUST00000208529 568 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Gm18052-201ENSMUST00000208750 559 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps54Q5SPW0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps54Q5SPW0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms