Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm12795-201ENSMUST00000117594 539 ntBASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm6407-201ENSMUST00000176468 549 ntBASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm807-202ENSMUST00000224929 408 ntBASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm28324-201ENSMUST00000187913 264 ntBASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm4482-201ENSMUST00000200876 742 ntBASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm45550-201ENSMUST00000209380 946 ntBASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc85aQ5SP85 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm24891-201ENSMUST00000104391 136 ntBASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm15881-201ENSMUST00000148792 942 ntBASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.75□□□□□ -0.21
Ccdc85aQ5SP85 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms