Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.21□□□□□ -0.14
Ccdc88aQ5SNZ0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm37246-201ENSMUST00000192665 835 ntBASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc88aQ5SNZ0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm5616-201ENSMUST00000165252 384 ntBASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm8741-201ENSMUST00000174736 384 ntBASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm9230-201ENSMUST00000188228 532 ntBASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm8325-201ENSMUST00000099086 453 ntBASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc88aQ5SNZ0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm12899-201ENSMUST00000120565 551 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm34023-201ENSMUST00000195539 217 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc88aQ5SNZ0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms