Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 AY036118-201ENSMUST00000200021 923 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm270-201ENSMUST00000223010 976 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm25517-201ENSMUST00000083865 134 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm13035-201ENSMUST00000117496 342 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.46□□□□□ -0.57
Urb1Q571H0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Gm15711-201ENSMUST00000118889 535 ntBASIC11.46□□□□□ -0.57
Urb1Q571H0 Gm12029-201ENSMUST00000120073 832 ntBASIC11.46□□□□□ -0.57
Urb1Q571H0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.46□□□□□ -0.57
Urb1Q571H0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.46□□□□□ -0.57
Urb1Q571H0 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.46□□□□□ -0.57
Urb1Q571H0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Urb1Q571H0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.46□□□□□ -0.57
Urb1Q571H0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Urb1Q571H0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Urb1Q571H0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.46□□□□□ -0.58
Urb1Q571H0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Urb1Q571H0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Urb1Q571H0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.46□□□□□ -0.58
Urb1Q571H0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.46□□□□□ -0.58
Urb1Q571H0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Gm43916-201ENSMUST00000205062 967 ntBASIC11.46□□□□□ -0.58
Urb1Q571H0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.46□□□□□ -0.58
Urb1Q571H0 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.46□□□□□ -0.58
Urb1Q571H0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Urb1Q571H0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Urb1Q571H0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Urb1Q571H0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Urb1Q571H0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Urb1Q571H0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Urb1Q571H0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms