Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Gm45433-201ENSMUST00000209386 247 ntBASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Rubie-203ENSMUST00000227803 2430 ntBASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Gm24934-201ENSMUST00000103764 111 ntBASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Gm23200-201ENSMUST00000104379 132 ntBASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Gm19187-201ENSMUST00000206781 892 ntBASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rc3h1Q4VGL6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gm7857-201ENSMUST00000117957 358 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gm4909-201ENSMUST00000118749 794 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gm17812-201ENSMUST00000204935 318 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms