Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Snord83b-201ENSMUST00000104546 94 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm27572-201ENSMUST00000183702 255 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm32025-201ENSMUST00000217960 307 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm5781-201ENSMUST00000219792 443 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm10478-201ENSMUST00000084451 396 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syne3Q4FZC9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm13492-201ENSMUST00000119772 665 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm7809-201ENSMUST00000153199 742 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm6222-202ENSMUST00000182143 629 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm24526-201ENSMUST00000082921 158 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syne3Q4FZC9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syne3Q4FZC9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms