Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upf3aQ3ULJ3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upf3aQ3ULJ3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upf3aQ3ULJ3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upf3aQ3ULJ3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upf3aQ3ULJ3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Gm15131-201ENSMUST00000119124 595 ntBASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Gm12501-201ENSMUST00000119163 529 ntBASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Gm12196-201ENSMUST00000120954 262 ntBASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upf3aQ3ULJ3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm23596-201ENSMUST00000104304 132 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm7851-201ENSMUST00000117574 323 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm4482-201ENSMUST00000200876 742 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.07□□□□□ -0.32
Upf3aQ3ULJ3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Upf3aQ3ULJ3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Upf3aQ3ULJ3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms