Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gm23119-201ENSMUST00000158610 140 ntBASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gm45865-201ENSMUST00000211815 945 ntBASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf44Q3UHJ8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Rnf17-202ENSMUST00000223627 2077 ntBASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gm13570-201ENSMUST00000140763 309 ntBASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gm9630-201ENSMUST00000178304 885 ntBASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gm7895-201ENSMUST00000187459 1173 ntBASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gm30285-201ENSMUST00000214614 422 ntBASIC12□□□□□ -0.49
Rnf44Q3UHJ8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Gm5884-201ENSMUST00000036712 1479 ntBASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf44Q3UHJ8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Gm26956-201ENSMUST00000182176 986 ntBASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Gm38341-201ENSMUST00000195357 515 ntBASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Gm43758-201ENSMUST00000199500 367 ntBASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Gm43822-201ENSMUST00000200285 476 ntBASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf44Q3UHJ8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms