Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gm13226-201ENSMUST00000117838 404 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gm14660-201ENSMUST00000119809 575 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gm7809-201ENSMUST00000153199 742 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gm3890-201ENSMUST00000182416 207 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Daam2-202ENSMUST00000224595 1926 ntBASIC11.72□□□□□ -0.53
Brf2Q3UAW9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Brf2Q3UAW9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm6222-202ENSMUST00000182143 629 ntBASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm44405-201ENSMUST00000198952 126 ntBASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Brf2Q3UAW9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Brf2Q3UAW9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms