Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.83□□□□□ -0.68
Q3U1D9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm5070-201ENSMUST00000177599 862 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Q3U1D9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Q3U1D9 Gm9230-201ENSMUST00000188228 532 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.83□□□□□ -0.68
Q3U1D9 Gm44262-201ENSMUST00000204969 372 ntBASIC10.83□□□□□ -0.68
Q3U1D9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.83□□□□□ -0.68
Q3U1D9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Q3U1D9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.83□□□□□ -0.68
Q3U1D9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm8385-201ENSMUST00000058999 643 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Q3U1D9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.83□□□□□ -0.68
Q3U1D9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Q3U1D9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Q3U1D9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Q3U1D9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.83□□□□□ -0.68
Q3U1D9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Q3U1D9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Gm24231-201ENSMUST00000104315 133 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Q3U1D9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 Gm14028-201ENSMUST00000117434 479 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Q3U1D9 Gm16505-201ENSMUST00000179981 232 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.82□□□□□ -0.68
Q3U1D9 Gm18304-201ENSMUST00000189162 546 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Gm44958-201ENSMUST00000203734 736 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.82□□□□□ -0.68
Q3U1D9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Q3U1D9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.82□□□□□ -0.68
Q3U1D9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.82□□□□□ -0.68
Q3U1D9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Q3U1D9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Q3U1D9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Q3U1D9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Q3U1D9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms