Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ctdnep1Q3TP92 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ctdnep1Q3TP92 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctdnep1Q3TP92 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.33□□□□□ -0.11
Ctdnep1Q3TP92 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctdnep1Q3TP92 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.33□□□□□ -0.11
Ctdnep1Q3TP92 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Gm25214-201ENSMUST00000104573 129 ntBASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Gm37201-201ENSMUST00000191845 523 ntBASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.33□□□□□ -0.12
Ctdnep1Q3TP92 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm11531-201ENSMUST00000117614 555 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm13392-201ENSMUST00000117708 150 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm4986-201ENSMUST00000119731 549 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm24845-201ENSMUST00000158034 109 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Mospd4-201ENSMUST00000180618 576 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdnep1Q3TP92 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Gm42599-201ENSMUST00000201308 469 ntBASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ctdnep1Q3TP92 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms