Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm12928-201ENSMUST00000117115 573 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm11814-201ENSMUST00000119515 929 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm13829-201ENSMUST00000119600 138 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm8463-201ENSMUST00000208573 613 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trim43aQ3TL54 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Snord83b-201ENSMUST00000104546 94 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Gm4984-201ENSMUST00000115987 360 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Gm18062-201ENSMUST00000208020 547 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Gm18055-201ENSMUST00000208254 547 ntBASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim43aQ3TL54 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim43aQ3TL54 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms