Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccbe1Q3MI99 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccbe1Q3MI99 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccbe1Q3MI99 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gm11424-201ENSMUST00000121929 829 ntBASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gm24158-201ENSMUST00000175263 71 ntBASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gm24420-201ENSMUST00000176676 59 ntBASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccbe1Q3MI99 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms