Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim63Q38HM4 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trim63Q38HM4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.18□□□□□ -0.78
Trim63Q38HM4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.18□□□□□ -0.78
Trim63Q38HM4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.18□□□□□ -0.78
Trim63Q38HM4 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim63Q38HM4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm23634-201ENSMUST00000175071 91 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm7461-201ENSMUST00000058918 827 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm37813-201ENSMUST00000195003 3695 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Trim63Q38HM4 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.17□□□□□ -0.78
Trim63Q38HM4 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim63Q38HM4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms