Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm17214-201ENSMUST00000164501 541 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm4775-201ENSMUST00000169588 402 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm17075-201ENSMUST00000171924 670 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.45□□□□□ -0.42
Col9a1Q05722 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm45258-201ENSMUST00000210042 853 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 AC147101.1-201ENSMUST00000217964 312 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 AC115357.1-201ENSMUST00000227575 466 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.45□□□□□ -0.42
Col9a1Q05722 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.45□□□□□ -0.42
Col9a1Q05722 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col9a1Q05722 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm11342-203ENSMUST00000224879 1324 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm23062-201ENSMUST00000102349 110 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm23596-201ENSMUST00000104304 132 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm23884-201ENSMUST00000122687 294 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm8723-201ENSMUST00000166076 820 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm8701-201ENSMUST00000169259 874 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm20414-201ENSMUST00000172918 646 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm23363-201ENSMUST00000175024 79 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-7-201ENSMUST00000180364 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm8869-201ENSMUST00000195222 947 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-6-201ENSMUST00000196127 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-12-201ENSMUST00000197274 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-5-201ENSMUST00000197439 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-10-201ENSMUST00000197745 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-11-201ENSMUST00000197952 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-4-201ENSMUST00000198665 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-9-201ENSMUST00000200087 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Mir669a-8-201ENSMUST00000200268 87 ntBASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col9a1Q05722 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a1Q05722 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms