Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn6Q03958 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.52□□□□□ -0.4
Pfdn6Q03958 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.52□□□□□ -0.41
Pfdn6Q03958 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.52□□□□□ -0.41
Pfdn6Q03958 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn6Q03958 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.51□□□□□ -0.41
Pfdn6Q03958 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn6Q03958 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms