Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.79□□□□□ -0.52
Nkx3-2P97503 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx3-2P97503 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm15808-201ENSMUST00000119046 604 ntBASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.79□□□□□ -0.52
Nkx3-2P97503 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.79□□□□□ -0.52
Nkx3-2P97503 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx3-2P97503 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm11930-201ENSMUST00000117788 190 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm17376-201ENSMUST00000166016 84 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm6082-201ENSMUST00000215204 454 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.78□□□□□ -0.52
Nkx3-2P97503 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx3-2P97503 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms