Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.65□□□□□ -0.22
Lig3P97386 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lig3P97386 Mir6927-201ENSMUST00000184494 71 ntBASIC13.65□□□□□ -0.22
Lig3P97386 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.65□□□□□ -0.22
Lig3P97386 Gm31256-201ENSMUST00000194705 506 ntBASIC13.65□□□□□ -0.22
Lig3P97386 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.65□□□□□ -0.22
Lig3P97386 Gm18584-201ENSMUST00000203098 964 ntBASIC13.65□□□□□ -0.22
Lig3P97386 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.65□□□□□ -0.22
Lig3P97386 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.65□□□□□ -0.22
Lig3P97386 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.65□□□□□ -0.22
Lig3P97386 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lig3P97386 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lig3P97386 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lig3P97386 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.64□□□□□ -0.23
Lig3P97386 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.64□□□□□ -0.23
Lig3P97386 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.64□□□□□ -0.23
Lig3P97386 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Lig3P97386 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lig3P97386 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lig3P97386 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.64□□□□□ -0.23
Lig3P97386 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Lig3P97386 Gm11637-201ENSMUST00000120601 592 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Gm16479-201ENSMUST00000121706 932 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Gm44069-201ENSMUST00000204898 506 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Gm13097-201ENSMUST00000210722 397 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.64□□□□□ -0.23
Lig3P97386 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Gm19163-201ENSMUST00000223313 780 ntBASIC13.64□□□□□ -0.23
Lig3P97386 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.64□□□□□ -0.23
Lig3P97386 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lig3P97386 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lig3P97386 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lig3P97386 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.63□□□□□ -0.23
Lig3P97386 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Lig3P97386 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Gm14130-201ENSMUST00000118417 987 ntBASIC13.63□□□□□ -0.23
Lig3P97386 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lig3P97386 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms