Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43bP86448 Gm16202-201ENSMUST00000117532 544 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim43bP86448 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43bP86448 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim43bP86448 Gm5370-201ENSMUST00000187187 574 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Gm10478-201ENSMUST00000084451 396 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim43bP86448 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim43bP86448 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43bP86448 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43bP86448 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim43bP86448 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim43bP86448 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
Trim43bP86448 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43bP86448 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43bP86448 Gm27514-201ENSMUST00000183692 110 ntBASIC12.81□□□□□ -0.36
Trim43bP86448 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim43bP86448 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Trim43bP86448 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43bP86448 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43bP86448 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43bP86448 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim43bP86448 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43bP86448 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43bP86448 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43bP86448 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43bP86448 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Gm11637-201ENSMUST00000120601 592 ntBASIC12.8□□□□□ -0.36
Trim43bP86448 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.8□□□□□ -0.36
Trim43bP86448 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.8□□□□□ -0.36
Trim43bP86448 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.8□□□□□ -0.36
Trim43bP86448 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.8□□□□□ -0.36
Trim43bP86448 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43bP86448 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim43bP86448 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim43bP86448 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43bP86448 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43bP86448 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms