Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Cxcr4P70658 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cxcr4P70658 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcr4P70658 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.68□□□□□ -0.54
Cxcr4P70658 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.68□□□□□ -0.54
Cxcr4P70658 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.68□□□□□ -0.54
Cxcr4P70658 Gm42693-201ENSMUST00000196779 631 ntBASIC11.68□□□□□ -0.54
Cxcr4P70658 Gm19184-201ENSMUST00000196798 928 ntBASIC11.68□□□□□ -0.54
Cxcr4P70658 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cxcr4P70658 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cxcr4P70658 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.67□□□□□ -0.54
Cxcr4P70658 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gm4768-201ENSMUST00000206199 686 ntBASIC11.67□□□□□ -0.54
Cxcr4P70658 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.67□□□□□ -0.54
Cxcr4P70658 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.67□□□□□ -0.54
Cxcr4P70658 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcr4P70658 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcr4P70658 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms