Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Mir449b-201ENSMUST00000104833 80 ntBASIC12.26□□□□□ -0.45
Shox2P70390 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Shox2P70390 Gm5687-201ENSMUST00000118252 640 ntBASIC12.26□□□□□ -0.45
Shox2P70390 Gm11779-201ENSMUST00000118541 368 ntBASIC12.26□□□□□ -0.45
Shox2P70390 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.26□□□□□ -0.45
Shox2P70390 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.26□□□□□ -0.45
Shox2P70390 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.26□□□□□ -0.45
Shox2P70390 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shox2P70390 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shox2P70390 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.26□□□□□ -0.45
Shox2P70390 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.26□□□□□ -0.45
Shox2P70390 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.26□□□□□ -0.45
Shox2P70390 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Shox2P70390 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shox2P70390 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Shox2P70390 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Shox2P70390 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Shox2P70390 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.25□□□□□ -0.45
Shox2P70390 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.25□□□□□ -0.45
Shox2P70390 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.25□□□□□ -0.45
Shox2P70390 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.25□□□□□ -0.45
Shox2P70390 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Shox2P70390 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shox2P70390 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Shox2P70390 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Shox2P70390 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shox2P70390 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms