Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ybx1P62960 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ybx1P62960 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ybx1P62960 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.74□□□□□ -0.37
Ybx1P62960 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ybx1P62960 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ybx1P62960 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Ybx1P62960 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Gm11450-201ENSMUST00000121144 333 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Gm9550-201ENSMUST00000161130 862 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.74□□□□□ -0.37
Ybx1P62960 Gm9230-201ENSMUST00000188228 532 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Gm18304-201ENSMUST00000189162 546 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Gm19994-201ENSMUST00000217086 586 ntBASIC12.74□□□□□ -0.37
Ybx1P62960 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.74□□□□□ -0.37
Ybx1P62960 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ybx1P62960 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Ybx1P62960 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ybx1P62960 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.73□□□□□ -0.37
Ybx1P62960 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.73□□□□□ -0.37
Ybx1P62960 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm9022-201ENSMUST00000182482 992 ntBASIC12.73□□□□□ -0.37
Ybx1P62960 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.73□□□□□ -0.37
Ybx1P62960 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm9996-201ENSMUST00000070359 913 ntBASIC12.73□□□□□ -0.37
Ybx1P62960 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ybx1P62960 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ybx1P62960 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ybx1P62960 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ybx1P62960 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ybx1P62960 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms