Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm3P62311 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm3P62311 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.3□□□□□ -0.6
Lsm3P62311 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.29□□□□□ -0.6
Lsm3P62311 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm5779-201ENSMUST00000218467 910 ntBASIC11.29□□□□□ -0.6
Lsm3P62311 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.29□□□□□ -0.6
Lsm3P62311 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lsm3P62311 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.29□□□□□ -0.6
Lsm3P62311 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.29□□□□□ -0.6
Lsm3P62311 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.29□□□□□ -0.6
Lsm3P62311 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm3P62311 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.28□□□□□ -0.6
Lsm3P62311 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.28□□□□□ -0.6
Lsm3P62311 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.28□□□□□ -0.6
Lsm3P62311 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lsm3P62311 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm24158-201ENSMUST00000175263 71 ntBASIC11.28□□□□□ -0.6
Lsm3P62311 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lsm3P62311 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.28□□□□□ -0.6
Lsm3P62311 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lsm3P62311 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.28□□□□□ -0.6
Lsm3P62311 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm3P62311 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Lsm3P62311 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.28□□□□□ -0.6
Lsm3P62311 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms