Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Gm11531-201ENSMUST00000117614 555 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Nup43P59235 Gm13570-201ENSMUST00000140763 309 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Gm25043-201ENSMUST00000158604 212 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.76□□□□□ -0.53
Nup43P59235 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.76□□□□□ -0.53
Nup43P59235 Mir8109-201ENSMUST00000184375 117 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Gm6621-201ENSMUST00000193251 772 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Gm45331-201ENSMUST00000209868 554 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nup43P59235 Gm5950-201ENSMUST00000213337 772 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Cog3-203ENSMUST00000227473 4197 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Nup43P59235 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Nup43P59235 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nup43P59235 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.75□□□□□ -0.53
Nup43P59235 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.75□□□□□ -0.53
Nup43P59235 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nup43P59235 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Nup43P59235 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nup43P59235 Gm15198-201ENSMUST00000117283 177 ntBASIC11.75□□□□□ -0.53
Nup43P59235 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.75□□□□□ -0.53
Nup43P59235 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Nup43P59235 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.75□□□□□ -0.53
Nup43P59235 Gm43438-201ENSMUST00000198133 379 ntBASIC11.75□□□□□ -0.53
Nup43P59235 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.75□□□□□ -0.53
Nup43P59235 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Gm24136-201ENSMUST00000083374 165 ntBASIC11.75□□□□□ -0.53
Nup43P59235 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Nup43P59235 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nup43P59235 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.75□□□□□ -0.53
Nup43P59235 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nup43P59235 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.75□□□□□ -0.53
Nup43P59235 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nup43P59235 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup43P59235 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nup43P59235 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nup43P59235 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms