Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.04□□□□□ -0.8
Sssca1P56873 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Sssca1P56873 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm26185-201ENSMUST00000157692 266 ntBASIC10.04□□□□□ -0.8
Sssca1P56873 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.04□□□□□ -0.8
Sssca1P56873 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm10576-201ENSMUST00000191927 825 ntBASIC10.04□□□□□ -0.8
Sssca1P56873 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.04□□□□□ -0.8
Sssca1P56873 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.04□□□□□ -0.8
Sssca1P56873 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.04□□□□□ -0.8
Sssca1P56873 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sssca1P56873 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.04□□□□□ -0.8
Sssca1P56873 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sssca1P56873 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.04□□□□□ -0.8
Sssca1P56873 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Sssca1P56873 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.03□□□□□ -0.8
Sssca1P56873 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Gm13123-201ENSMUST00000122173 492 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Sssca1P56873 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm17208-201ENSMUST00000168388 535 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm25927-201ENSMUST00000175058 117 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm2495-201ENSMUST00000191160 466 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Gm42599-201ENSMUST00000201308 469 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.03□□□□□ -0.8
Sssca1P56873 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.03□□□□□ -0.8
Sssca1P56873 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Sssca1P56873 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Sssca1P56873 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sssca1P56873 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sssca1P56873 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms