Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdh11P55288 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Cdh11P55288 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh11P55288 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh11P55288 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gm14350-201ENSMUST00000116642 640 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Gm1335-201ENSMUST00000121653 386 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdh11P55288 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cdh11P55288 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gm19184-201ENSMUST00000196798 928 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdh11P55288 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh11P55288 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdh11P55288 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh11P55288 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh11P55288 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.36□□□□□ -0.59
Cdh11P55288 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh11P55288 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh11P55288 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.35□□□□□ -0.59
Cdh11P55288 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh11P55288 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh11P55288 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh11P55288 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.35□□□□□ -0.59
Cdh11P55288 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.35□□□□□ -0.59
Cdh11P55288 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdh11P55288 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh11P55288 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh11P55288 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms