Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm12030-201ENSMUST00000121917 223 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox1P53783 Gm22146-201ENSMUST00000157397 288 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Gm4654-201ENSMUST00000183305 982 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox1P53783 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox1P53783 Gm5700-201ENSMUST00000191483 989 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.7□□□□□ -0.38
Sox1P53783 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox1P53783 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox1P53783 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox1P53783 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.69□□□□□ -0.38
Sox1P53783 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.69□□□□□ -0.38
Sox1P53783 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox1P53783 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Sox1P53783 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.69□□□□□ -0.38
Sox1P53783 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Gm9507-202ENSMUST00000180157 654 ntBASIC12.69□□□□□ -0.38
Sox1P53783 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox1P53783 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.69□□□□□ -0.38
Sox1P53783 Gm42433-201ENSMUST00000196806 940 ntBASIC12.69□□□□□ -0.38
Sox1P53783 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.69□□□□□ -0.38
Sox1P53783 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox1P53783 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox1P53783 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox1P53783 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox1P53783 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.68□□□□□ -0.38
Sox1P53783 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox1P53783 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Gm13286-201ENSMUST00000117750 537 ntBASIC12.68□□□□□ -0.38
Sox1P53783 Gm11578-201ENSMUST00000118530 459 ntBASIC12.68□□□□□ -0.38
Sox1P53783 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox1P53783 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Sox1P53783 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox1P53783 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.68□□□□□ -0.38
Sox1P53783 Gm28686-201ENSMUST00000187404 609 ntBASIC12.68□□□□□ -0.38
Sox1P53783 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.68□□□□□ -0.38
Sox1P53783 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.68□□□□□ -0.38
Sox1P53783 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.68□□□□□ -0.38
Sox1P53783 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox1P53783 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox1P53783 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms