Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.94□□□□□ -0.66
GdnfP48540 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Gm13612-201ENSMUST00000119276 390 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Gm6244-201ENSMUST00000178732 841 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Gm27390-201ENSMUST00000184516 176 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
GdnfP48540 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
GdnfP48540 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.93□□□□□ -0.66
GdnfP48540 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
GdnfP48540 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
GdnfP48540 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
GdnfP48540 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Gm13366-201ENSMUST00000122198 970 ntBASIC10.93□□□□□ -0.66
GdnfP48540 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.93□□□□□ -0.66
GdnfP48540 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Gm23958-201ENSMUST00000157207 105 ntBASIC10.93□□□□□ -0.66
GdnfP48540 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.93□□□□□ -0.66
GdnfP48540 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.93□□□□□ -0.66
GdnfP48540 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.93□□□□□ -0.66
GdnfP48540 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.93□□□□□ -0.66
GdnfP48540 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.93□□□□□ -0.66
GdnfP48540 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
GdnfP48540 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
GdnfP48540 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms