Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm6218-201ENSMUST00000219812 628 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.97□□□□□ -0.49
Prox1P48437 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.96□□□□□ -0.49
Prox1P48437 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.96□□□□□ -0.49
Prox1P48437 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Prox1P48437 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.96□□□□□ -0.49
Prox1P48437 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Prox1P48437 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Prox1P48437 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.96□□□□□ -0.49
Prox1P48437 Gm44069-201ENSMUST00000204898 506 ntBASIC11.96□□□□□ -0.49
Prox1P48437 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.96□□□□□ -0.49
Prox1P48437 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Prox1P48437 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Prox1P48437 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Prox1P48437 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Prox1P48437 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.96□□□□□ -0.5
Prox1P48437 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Prox1P48437 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Prox1P48437 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Prox1P48437 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.96□□□□□ -0.5
Prox1P48437 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Prox1P48437 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.95□□□□□ -0.5
Prox1P48437 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Gm5687-201ENSMUST00000118252 640 ntBASIC11.95□□□□□ -0.5
Prox1P48437 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.95□□□□□ -0.5
Prox1P48437 Gm15429-201ENSMUST00000151268 798 ntBASIC11.95□□□□□ -0.5
Prox1P48437 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.95□□□□□ -0.5
Prox1P48437 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.95□□□□□ -0.5
Prox1P48437 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Prox1P48437 Gm43438-201ENSMUST00000198133 379 ntBASIC11.95□□□□□ -0.5
Prox1P48437 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.95□□□□□ -0.5
Prox1P48437 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.95□□□□□ -0.5
Prox1P48437 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Prox1P48437 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms