Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.01□□□□□ -0.49
Tnfsf4P43488 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.01□□□□□ -0.49
Tnfsf4P43488 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12□□□□□ -0.49
Tnfsf4P43488 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 Gm43823-201ENSMUST00000197391 1808 ntBASIC12□□□□□ -0.49
Tnfsf4P43488 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12□□□□□ -0.49
Tnfsf4P43488 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12□□□□□ -0.49
Tnfsf4P43488 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12□□□□□ -0.49
Tnfsf4P43488 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Tnfsf4P43488 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12□□□□□ -0.49
Tnfsf4P43488 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfsf4P43488 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfsf4P43488 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.99□□□□□ -0.49
Tnfsf4P43488 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm7029-201ENSMUST00000173226 450 ntBASIC11.99□□□□□ -0.49
Tnfsf4P43488 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm27486-201ENSMUST00000184923 80 ntBASIC11.99□□□□□ -0.49
Tnfsf4P43488 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Gm24136-201ENSMUST00000083374 165 ntBASIC11.99□□□□□ -0.49
Tnfsf4P43488 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms