Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx1-2P42580 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.28■□□□□ 0.04
Nkx1-2P42580 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.28■□□□□ 0.04
Nkx1-2P42580 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.28■□□□□ 0.04
Nkx1-2P42580 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.28■□□□□ 0.04
Nkx1-2P42580 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx1-2P42580 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm24231-201ENSMUST00000104315 133 ntBASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm11478-201ENSMUST00000117851 599 ntBASIC15.27■□□□□ 0.04
Nkx1-2P42580 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.27■□□□□ 0.04
Nkx1-2P42580 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.27■□□□□ 0.04
Nkx1-2P42580 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Gm10268-201ENSMUST00000085340 555 ntBASIC15.27■□□□□ 0.04
Nkx1-2P42580 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx1-2P42580 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx1-2P42580 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.27■□□□□ 0.03
Nkx1-2P42580 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.26■□□□□ 0.03
Nkx1-2P42580 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx1-2P42580 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Gm24526-201ENSMUST00000082921 158 ntBASIC15.26■□□□□ 0.03
Nkx1-2P42580 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx1-2P42580 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms