Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Kdm5cP41230 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Kdm5cP41230 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm5434-202ENSMUST00000222384 1451 ntBASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm5434-201ENSMUST00000071825 1451 ntBASIC17.7■□□□□ 0.42
Kdm5cP41230 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm12783-201ENSMUST00000121425 397 ntBASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC17.7■□□□□ 0.42
Kdm5cP41230 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm45500-201ENSMUST00000211676 803 ntBASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Kdm5cP41230 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Gm4604-201ENSMUST00000025040 390 ntBASIC17.7■□□□□ 0.42
Kdm5cP41230 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kdm5cP41230 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Kdm5cP41230 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kdm5cP41230 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm14274-201ENSMUST00000117182 615 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm19587-201ENSMUST00000191395 545 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm6108-201ENSMUST00000208365 367 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 AC129308.3-201ENSMUST00000225652 524 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 AC165154.1-201ENSMUST00000226661 340 ntBASIC17.69■□□□□ 0.42
Kdm5cP41230 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kdm5cP41230 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Kdm5cP41230 AC166836.1-201ENSMUST00000219933 1795 ntBASIC17.68■□□□□ 0.42
Kdm5cP41230 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Gm7150-201ENSMUST00000122032 981 ntBASIC17.68■□□□□ 0.42
Kdm5cP41230 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Gm37981-201ENSMUST00000194280 535 ntBASIC17.68■□□□□ 0.42
Kdm5cP41230 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Kdm5cP41230 AC154572.1-201ENSMUST00000226098 1204 ntBASIC17.68■□□□□ 0.42
Kdm5cP41230 AC102368.1-201ENSMUST00000227161 892 ntBASIC17.68■□□□□ 0.42
Kdm5cP41230 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.68■□□□□ 0.42
Kdm5cP41230 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kdm5cP41230 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Kdm5cP41230 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm5cP41230 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm5cP41230 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC17.67■□□□□ 0.42
Kdm5cP41230 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC17.67■□□□□ 0.42
Kdm5cP41230 Gm5706-201ENSMUST00000181525 993 ntBASIC17.67■□□□□ 0.42
Kdm5cP41230 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Kdm5cP41230 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm5cP41230 Gm43610-201ENSMUST00000199117 365 ntBASIC17.67■□□□□ 0.42
Kdm5cP41230 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Kdm5cP41230 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.67■□□□□ 0.42
Kdm5cP41230 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Kdm5cP41230 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Kdm5cP41230 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm5cP41230 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kdm5cP41230 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms