Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm4735-201ENSMUST00000138679 1302 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Gm5855-201ENSMUST00000200240 1305 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rpl28P41105 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm16342-201ENSMUST00000124025 1025 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC8.37□□□□□ -1.07
Rpl28P41105 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Rpl28P41105 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm44397-201ENSMUST00000195950 113 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Gm6983-201ENSMUST00000214912 628 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 AC125117.1-201ENSMUST00000228121 468 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rpl28P41105 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm16372-201ENSMUST00000073088 450 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 AC211878.3-201ENSMUST00000222629 2018 ntBASIC8.37□□□□□ -1.07
Rpl28P41105 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rpl28P41105 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC8.36□□□□□ -1.07
Rpl28P41105 Gm9755-201ENSMUST00000032981 1356 ntBASIC8.36□□□□□ -1.07
Rpl28P41105 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC8.36□□□□□ -1.07
Rpl28P41105 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC8.36□□□□□ -1.07
Rpl28P41105 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Gm29608-201ENSMUST00000190444 463 ntBASIC8.36□□□□□ -1.07
Rpl28P41105 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl28P41105 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rpl28P41105 Gm26035-201ENSMUST00000083065 308 ntBASIC8.36□□□□□ -1.07
Rpl28P41105 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl28P41105 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms