Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Gm17150-201ENSMUST00000165577 381 ntBASIC11.71□□□□□ -0.53
Sox6P40645 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox6P40645 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox6P40645 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.71□□□□□ -0.53
Sox6P40645 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox6P40645 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Sox6P40645 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.71□□□□□ -0.54
Sox6P40645 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox6P40645 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.7□□□□□ -0.54
Sox6P40645 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.7□□□□□ -0.54
Sox6P40645 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.7□□□□□ -0.54
Sox6P40645 Gm7561-201ENSMUST00000211203 886 ntBASIC11.7□□□□□ -0.54
Sox6P40645 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.7□□□□□ -0.54
Sox6P40645 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.7□□□□□ -0.54
Sox6P40645 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.7□□□□□ -0.54
Sox6P40645 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox6P40645 Gm6091-201ENSMUST00000098307 165 ntBASIC11.7□□□□□ -0.54
Sox6P40645 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox6P40645 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox6P40645 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sox6P40645 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Gm11978-201ENSMUST00000122315 466 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sox6P40645 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox6P40645 Gm43433-201ENSMUST00000196573 481 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox6P40645 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox6P40645 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.69□□□□□ -0.54
Sox6P40645 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox6P40645 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms