Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm9797-202ENSMUST00000218003 294 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm19009-201ENSMUST00000223072 823 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cxcl12P40224 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.77□□□□□ -0.37
Cxcl12P40224 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcl12P40224 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cxcl12P40224 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.76□□□□□ -0.37
Cxcl12P40224 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.76□□□□□ -0.37
Cxcl12P40224 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm43778-201ENSMUST00000199438 199 ntBASIC12.76□□□□□ -0.37
Cxcl12P40224 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.76□□□□□ -0.37
Cxcl12P40224 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cxcl12P40224 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.76□□□□□ -0.37
Cxcl12P40224 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.76□□□□□ -0.37
Cxcl12P40224 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cxcl12P40224 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cxcl12P40224 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.76□□□□□ -0.37
Cxcl12P40224 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cxcl12P40224 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm14193-201ENSMUST00000105067 153 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.75□□□□□ -0.37
Cxcl12P40224 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Mir8115-201ENSMUST00000184992 119 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 Gm9111-201ENSMUST00000219394 709 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.75□□□□□ -0.37
Cxcl12P40224 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.75□□□□□ -0.37
Cxcl12P40224 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl12P40224 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms