Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PtprkP35822 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PtprkP35822 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PtprkP35822 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Gm5380-201ENSMUST00000119296 2136 ntBASIC19.42■□□□□ 0.7
PtprkP35822 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC19.42■□□□□ 0.7
PtprkP35822 Gm15207-201ENSMUST00000119259 442 ntBASIC19.42■□□□□ 0.7
PtprkP35822 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC19.42■□□□□ 0.7
PtprkP35822 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PtprkP35822 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC19.42■□□□□ 0.7
PtprkP35822 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC19.42■□□□□ 0.7
PtprkP35822 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PtprkP35822 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PtprkP35822 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PtprkP35822 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC19.41■□□□□ 0.7
PtprkP35822 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Gm45113-201ENSMUST00000207518 165 ntBASIC19.41■□□□□ 0.7
PtprkP35822 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC19.41■□□□□ 0.7
PtprkP35822 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC19.41■□□□□ 0.7
PtprkP35822 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PtprkP35822 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PtprkP35822 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PtprkP35822 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Gm38346-201ENSMUST00000192379 2639 ntBASIC19.41■□□□□ 0.7
PtprkP35822 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Gm6189-201ENSMUST00000164487 2082 ntBASIC19.41■□□□□ 0.7
PtprkP35822 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 n-R5s84-201ENSMUST00000122591 109 ntBASIC19.41■□□□□ 0.7
PtprkP35822 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC19.41■□□□□ 0.7
PtprkP35822 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PtprkP35822 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC19.41■□□□□ 0.7
PtprkP35822 Gm18706-201ENSMUST00000210053 1066 ntBASIC19.41■□□□□ 0.7
PtprkP35822 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 CT010486.3-201ENSMUST00000224555 811 ntBASIC19.41■□□□□ 0.7
PtprkP35822 AC154257.1-202ENSMUST00000224729 843 ntBASIC19.41■□□□□ 0.7
PtprkP35822 Lgi3-203ENSMUST00000226548 1001 ntBASIC19.41■□□□□ 0.7
PtprkP35822 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
PtprkP35822 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PtprkP35822 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Gm2420-201ENSMUST00000119864 2149 ntBASIC19.4■□□□□ 0.7
PtprkP35822 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Gm28323-201ENSMUST00000186817 2499 ntBASIC19.4■□□□□ 0.7
PtprkP35822 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PtprkP35822 Gm37348-201ENSMUST00000193104 1789 ntBASIC19.4■□□□□ 0.7
PtprkP35822 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC19.4■□□□□ 0.7
PtprkP35822 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 CT485606.1-201ENSMUST00000213187 878 ntBASIC19.4■□□□□ 0.7
PtprkP35822 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 AC160405.1-201ENSMUST00000218207 1545 ntBASIC19.4■□□□□ 0.7
PtprkP35822 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PtprkP35822 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PtprkP35822 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms