Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Mir7686-201ENSMUST00000200604 57 ntBASIC11.49□□□□□ -0.57
Sftpa1P35242 Gm4482-201ENSMUST00000200876 742 ntBASIC11.49□□□□□ -0.57
Sftpa1P35242 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.49□□□□□ -0.57
Sftpa1P35242 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sftpa1P35242 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Sftpa1P35242 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Matn2-206ENSMUST00000228570 2798 ntBASIC11.49□□□□□ -0.57
Sftpa1P35242 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.49□□□□□ -0.57
Sftpa1P35242 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.48□□□□□ -0.57
Sftpa1P35242 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm29155-201ENSMUST00000185910 269 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm9132-201ENSMUST00000210182 832 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.48□□□□□ -0.57
Sftpa1P35242 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sftpa1P35242 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sftpa1P35242 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm12795-201ENSMUST00000117594 539 ntBASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Sftpa1P35242 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms