Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Apoc1P34928 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Apoc1P34928 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Apoc1P34928 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Gm16479-201ENSMUST00000121706 932 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Apoc1P34928 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.87□□□□□ -0.67
Apoc1P34928 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.87□□□□□ -0.67
Apoc1P34928 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Apoc1P34928 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Apoc1P34928 Gm5356-201ENSMUST00000093326 615 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 Map1b-203ENSMUST00000223725 2669 ntBASIC10.87□□□□□ -0.67
Apoc1P34928 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Apoc1P34928 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.87□□□□□ -0.67
Apoc1P34928 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.87□□□□□ -0.67
Apoc1P34928 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Apoc1P34928 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Apoc1P34928 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Apoc1P34928 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Apoc1P34928 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm23984-201ENSMUST00000157139 203 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Apoc1P34928 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Gm37042-201ENSMUST00000193816 581 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Gm37497-201ENSMUST00000195830 798 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.86□□□□□ -0.67
Apoc1P34928 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Apoc1P34928 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Apoc1P34928 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Apoc1P34928 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.86□□□□□ -0.67
Apoc1P34928 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Apoc1P34928 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.85□□□□□ -0.67
Apoc1P34928 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.85□□□□□ -0.67
Apoc1P34928 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Apoc1P34928 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms