Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.82□□□□□ -0.36
Nfkb1P25799 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Nfkb1P25799 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.82□□□□□ -0.36
Nfkb1P25799 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.82□□□□□ -0.36
Nfkb1P25799 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.82□□□□□ -0.36
Nfkb1P25799 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nfkb1P25799 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.82□□□□□ -0.36
Nfkb1P25799 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nfkb1P25799 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.82□□□□□ -0.36
Nfkb1P25799 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nfkb1P25799 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.81□□□□□ -0.36
Nfkb1P25799 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Gm14028-201ENSMUST00000117434 479 ntBASIC12.81□□□□□ -0.36
Nfkb1P25799 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Gm5070-201ENSMUST00000177599 862 ntBASIC12.81□□□□□ -0.36
Nfkb1P25799 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Gm42937-201ENSMUST00000197360 752 ntBASIC12.81□□□□□ -0.36
Nfkb1P25799 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nfkb1P25799 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.81□□□□□ -0.36
Nfkb1P25799 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nfkb1P25799 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.8□□□□□ -0.36
Nfkb1P25799 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm6963-201ENSMUST00000147879 379 ntBASIC12.8□□□□□ -0.36
Nfkb1P25799 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms