Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfrsf1bP25119 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm12314-201ENSMUST00000118104 538 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm14760-201ENSMUST00000121831 999 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm27243-201ENSMUST00000183964 521 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm30285-201ENSMUST00000214614 422 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfrsf1bP25119 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Cog3-203ENSMUST00000227473 4197 ntBASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm25214-201ENSMUST00000104573 129 ntBASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm11222-201ENSMUST00000119005 738 ntBASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf1bP25119 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms