Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pde6bP23440 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pde6bP23440 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.63□□□□□ -0.23
Pde6bP23440 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pde6bP23440 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.63□□□□□ -0.23
Pde6bP23440 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 B9d1os-201ENSMUST00000137010 674 ntBASIC13.63□□□□□ -0.23
Pde6bP23440 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.63□□□□□ -0.23
Pde6bP23440 Gm16296-201ENSMUST00000159905 325 ntBASIC13.63□□□□□ -0.23
Pde6bP23440 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pde6bP23440 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.63□□□□□ -0.23
Pde6bP23440 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.63□□□□□ -0.23
Pde6bP23440 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pde6bP23440 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pde6bP23440 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pde6bP23440 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pde6bP23440 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.63□□□□□ -0.23
Pde6bP23440 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pde6bP23440 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.62□□□□□ -0.23
Pde6bP23440 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.62□□□□□ -0.23
Pde6bP23440 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.62□□□□□ -0.23
Pde6bP23440 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.62□□□□□ -0.23
Pde6bP23440 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.62□□□□□ -0.23
Pde6bP23440 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.62□□□□□ -0.23
Pde6bP23440 Gm25007-201ENSMUST00000083808 133 ntBASIC13.62□□□□□ -0.23
Pde6bP23440 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6bP23440 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.62□□□□□ -0.23
Pde6bP23440 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.61□□□□□ -0.23
Pde6bP23440 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.61□□□□□ -0.23
Pde6bP23440 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6bP23440 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Pde6bP23440 Gm14208-201ENSMUST00000119645 678 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms